Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
CREBBP

Cell type

Cell type Class
Blood
Cell type
MV-4-11
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Acute Myelogenous

Attributes by original data submitter

Sample

source_name
MV411 cell line
cell line
MV411 leukemia cell line
treatment
PBS control
time
4 hr
chip antibody
Cell Signaling #7425 Anti-CBP, rabbit monoclonal, Clone D9B6, lot #1

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
ChIP-seq libraries were constructed with the NEBNext ChIP-seq library prep kit following the manufacturer's recommended protocol (New England Biolabs, Ipswich, MA, USA).

Sequencing Platform

instrument_model
Illumina HiSeq 2500

hg38

Number of total reads
28767228
Reads aligned (%)
97.7
Duplicates removed (%)
4.8
Number of peaks
4489 (qval < 1E-05)

hg19

Number of total reads
28767228
Reads aligned (%)
96.5
Duplicates removed (%)
5.1
Number of peaks
4094 (qval < 1E-05)

Base call quality data from DBCLS SRA